Getting Started
Lab Atlas gives you two ways to work with your data programmatically:
REST API — a versioned HTTP API (
/api/v1/) for scripts, integrations, and automation.MCP server — a Model Context Protocol endpoint (
/mcp) that lets AI agents (Claude Code, claude.ai, the Anthropic API) read your Lab Atlas data with natural-language prompts.
Both surfaces authenticate with the same API key, scoped to your user and organization. Whatever you can see in the web app, your key can see — no more.
API and MCP tools are currently limited to Enterprise customers only.
Create an API key
API keys are created from your the Organization Settings dashboard, accessible to Organization Admins and Super Users in your organization.
You can revoke or delete keys at any time from the same page.

Use the REST API
Pass your key in the X-API-KEY header. The base URL is https://<your-tenant>.labatlas.com/api/v1/.
Use X-API-KEY (or Authorization: ApiKey <key>). Do not use Authorization: Bearer … — that scheme is reserved for the internal web client and will be rejected on /api/v1/.
For the full endpoint list, pagination, permissions model, and error formats, see the Public API Reference.
Connect via MCP
Point your MCP client at https://<your-tenant>.labatlas.com/mcp over Streamable HTTP, sending your API key in the X-API-KEY header.
In Settings → Connectors, add a custom connector:
URL —
https://<your-tenant>.labatlas.com/mcpTransport — HTTP / Streamable HTTP
Header name —
X-API-KEYHeader value — your Lab Atlas API key
For the full tool list, example prompts, and troubleshooting, see the MCP User Guide.
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